Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015891785.1_cds_XP_016446646.1_41480
CDS Infomation

[gene=LOC107771716] [db_xref=GeneID:107771716] [protein=pentatricopeptide repeat-containing protein MRL1, chloroplastic-like] [protein_id=XP_016446646.1] [location=join(99378..99692,101509..102223,102408..102636,103101..103164,103245..103389,103589..103704,104654..104782,104935..105108,105223..105387,105626..105766,107034..107133,107504..107612,107728..107869,108766..109005,109102..109194,109529..109577,109783..109876,110294..110528)] [gbkey=CDS]
Sequence

ATGGACTCAATATTCTCTCCAAAACCTCACACGCTTTCTCTAATATCTTGCTCTCCAATC
TCCTCTTCTCTTATTCCTCGCCGCCACCAATGCTTCTTCGGTTCTAGCCATAATAATTTA
CGGTCTCCTGTCCTTCTTCGCTCGCGGAGGAAATGTCGAAATATCGGCTTTCAATTTGGC
GCTCACTCTTCGCCATTTGTCCTCAGAGCTTCTCTTGATTCGCAATCGGTTGTCGTTGTT
GCTGCCGTTGTCACTATCTCTGCTCTTACAATCATCTTTTTTGAATTTTCCAAACGAAAT
GCCAATTTAAAGGAGATTTCAGCTGAGCTTACTCTTGCTTTGCGGCGACAAATAAGACAT
GTGATGAACTGGTTTCCACGTCATGTATTTGCTCTTATAAACATACAGGAGGAGAAATCC
GTCGAAACTTCGATGACGGAAGTATCCAAAGTCAGCAATGAGCTTGAGGATGCGGGGACA
GATGTGCAACTAGGTGGAGCCTATTTGATGCAAACCGTTATTACCAACAAAATTGAGTCT
GCAGATGCTAATCAGATGGCTTCTAGTTCCGGTGGATCTTTGACCTTAGGAGCACCTGGA
TCTAACACACACGCTGAATCAGATGTAGTACCATCATCATCTTTTGTGGCAGAGTCGCTC
AACAATTATCTGCAGGAACATCTACAGGGAACTAAAACGAGTAACAGATTGACTACGGAG
GAAGTCAGTTCAGAGCATAGTGTTGGTTTGTTTCCTGCAATCAACATAGATAAAGGAATT
GAAGAAACCAAGAAAACAGACCATGCACTCATGGCGGACGGTGGACTTAAGATAGCCCAT
AAACATGTTGCAGAGGATGAAGTCAGTATCCATAATCTTATTTTCAGGGATTCTGCGCGC
AAAGAGTTGTACTCATTCTTTGAGGCATCTACCAAAAGTCTAAATGGCCAAAAAGCATTG
ACTTCTCATGCTTCTGGTGAACGCATTAGCGTCTTTTCACACACCTCAAAAGTTTCTTCA
ATACAAGCAGAGGATTTTAAGGAGAAAAGTCCTCATGGATGTTATAAAGAAGGACCATTC
AATAACAAGGACTTTGGGAAAAGAAAGAACCATTTCACTAAGAAGGAAAAGAGCATTCTA
CTGGACAATGGTACCACAAAGCAGTTTCAGATTCCTAATCCAAAGGGGATCCAAGTGTGT
GATGGACCTCAACCATCTGACCAATTCAGAGCTTATCGCCGTTTCCTGAGAGAGGGCAGG
TTGATGGACTGCATAGAAATGCTTGACAATATGGAAAGGCACGGTTCATTGAATATGGAT
AAAGTATATCATGCTGGTTTCTTCCAAGCCTGTAAAAGTCAAAAGGCAGTGAAGGAAGCT
TTCCGTTTCACCAAGCTTATCCAAAATCCAACTCTAAGCACATTCAATATGCTCTTGTCT
GTATGTGCAACCTCACGGGATCTGGAGGGTGCTTTTCGAGTGGTTCAACTTGTCCGTGAG
ACTGGACTGAAACCTGACTGCAAGCTCTACACTACTCTTATATCAACTTGTGCAAAATCT
GGGAAAGTTGATACCATGTTTGAGGTTTTTCATGAAATGGTCAATGCTGGAGTTGAACCA
AATGTTAATACATATGGTGCACTTATTGATGGGTGTGCTAAAGCTGGACAAGTTGCGAAG
GCATTCGGTGCCTATGGTATAATGAGATCTAAGAATGTGAAGCCAGATCGTGTTGTATTC
AATGCTCTTATCACAGCTTGTGGTCAATCAGGAGCAGTGGATCGTGCATTTGATGTCTTA
TCTGAGATGAAAGCAGAAGCACGACCAATAGAACCTGATCAGATTACTGTTGGGGCTTTG
ATGAAGGCATGTGCAAATGCCGGTCAGGTTGATCGAGCTCTGGATGTTTACCGTATGATT
GATAAATATGATATCAAGGGCACAGCAGAGGTTTACACGATTGCTGTAAATTGTTGTAGT
CAAAATGGTAACTGGGATTTTGCGCGCAGCATTTATGATGACATGACTAGAAAAGGTGTT
TATCCAGATGAGATGTTTATCAGTGCGCTGGTAGATGTGGCAGGGCACGCTGGTAAGTTG
GATGCTGCATTTGATGTTCTAGAAGAAGCCAGGACTAAAGGCATAAATGTGGGATCTATG
TCATATAGCTCATTGATGGGAGCCTGTAGTAATGCAAAGAACTGGCAGAAGGCACTAGAA
TTGTATGAGGATGTTAAAGGCGTCAAGTTAAAACCAACCGTTTCAATGATGAATGCATTG
GTAACTGCATTATGTGATGCTGATCAATATCAGAAGGCTCTGGAAATTTTTTCTGAAATG
AAGAGAGTGGACCTATGCCCTAACACCATTACATACTCCACTCTGTTAGTGGCAAGTGAA
AAAAAGGATGACTTGGATATTGGCCTCATGCTTCTTTCTCATGCTAAAAAGGATGGTGTT
TCCCCAAACCTTGTTATGTGCAGATGTCTTCTTGGTAAGAATTATAAGCTTGTCAATCGA
TCGCATAAGGTATATTGTATCTTGGTCTGCAGGACATCGTTGGCCTTAATGATCTACAGG
GAAACAATTGCAGCTGGTGTGGTACCCACAATGGATGAGCTATCACTAGTTCTGGGTTGC
CTACAGCTTCCTCGCGATGCATCACTGAAAGAAAGACTTATTGAGAATCTAGGATTAACT
GTTGAAACATCAAAGGGCTCAAACCTGTGCTCTTTGATTGATGGATTTGGTGAATATGAT
TCCCGTGCCTTTTCATTGCTTGAGGAGGCAGCTTCACTTGGGACCATCCCTTTGACTTCT
TTAAAGGGAAATCCTGTTGCCGTCGATGCGAGGAATTTGCACATTCATACAGCTCAGGTA
TATCTTTTGACTGTCCTAAAGGGTCTCAAGCATCGTCTGGCTGCAGGTGCAAAAATACCA
AACATATCCATTCTACTCCCTGTAGAGCAGTCACATATTCAGACACCCACTGGCGAGAAA
ACAATTAAGATTGCTGGAAGGATTAACCGGGCAGTTGCAGCACTTTTGAGGAGGCTTGGC
TTGCCTTATCAAGGGAATGAATCGTATGGGAAGATTCGAATCAATGGTGTTATTGTGAAA
AAGTGGTTCCAGCCAAAGCTCGAATCCCCTTTCAGTTGGGAACAGACAGATCTGAGCTTC
TCCCCGACACGGCTAAGAAAAGGAATTAGCCATCAGCAGCGTAATATTCGAGCAGGCAAT
TTGTCCTTAGATTAG

Peptide Sequence

PEP ID

XP_016446646.1
PEP Infomation

PREDICTED: pentatricopeptide repeat-containing protein MRL1, chloroplastic-like [Nicotiana tabacum]
Sequence

MDSIFSPKPHTLSLISCSPISSSLIPRRHQCFFGSSHNNLRSPVLLRSRRKCRNIGFQFG
AHSSPFVLRASLDSQSVVVVAAVVTISALTIIFFEFSKRNANLKEISAELTLALRRQIRH
VMNWFPRHVFALINIQEEKSVETSMTEVSKVSNELEDAGTDVQLGGAYLMQTVITNKIES
ADANQMASSSGGSLTLGAPGSNTHAESDVVPSSSFVAESLNNYLQEHLQGTKTSNRLTTE
EVSSEHSVGLFPAINIDKGIEETKKTDHALMADGGLKIAHKHVAEDEVSIHNLIFRDSAR
KELYSFFEASTKSLNGQKALTSHASGERISVFSHTSKVSSIQAEDFKEKSPHGCYKEGPF
NNKDFGKRKNHFTKKEKSILLDNGTTKQFQIPNPKGIQVCDGPQPSDQFRAYRRFLREGR
LMDCIEMLDNMERHGSLNMDKVYHAGFFQACKSQKAVKEAFRFTKLIQNPTLSTFNMLLS
VCATSRDLEGAFRVVQLVRETGLKPDCKLYTTLISTCAKSGKVDTMFEVFHEMVNAGVEP
NVNTYGALIDGCAKAGQVAKAFGAYGIMRSKNVKPDRVVFNALITACGQSGAVDRAFDVL
SEMKAEARPIEPDQITVGALMKACANAGQVDRALDVYRMIDKYDIKGTAEVYTIAVNCCS
QNGNWDFARSIYDDMTRKGVYPDEMFISALVDVAGHAGKLDAAFDVLEEARTKGINVGSM
SYSSLMGACSNAKNWQKALELYEDVKGVKLKPTVSMMNALVTALCDADQYQKALEIFSEM
KRVDLCPNTITYSTLLVASEKKDDLDIGLMLLSHAKKDGVSPNLVMCRCLLGKNYKLVNR
SHKVYCILVCRTSLALMIYRETIAAGVVPTMDELSLVLGCLQLPRDASLKERLIENLGLT
VETSKGSNLCSLIDGFGEYDSRAFSLLEEAASLGTIPLTSLKGNPVAVDARNLHIHTAQV
YLLTVLKGLKHRLAAGAKIPNISILLPVEQSHIQTPTGEKTIKIAGRINRAVAALLRRLG
LPYQGNESYGKIRINGVIVKKWFQPKLESPFSWEQTDLSFSPTRLRKGISHQQRNIRAGN
LSLD

Transcript Sequence

Gene sequence data has not been registered.